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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808885.1_cds_XP_016495547.1_9853
CDS Infomation

[gene=LOC107814619] [db_xref=GeneID:107814619] [protein=potassium channel AKT1-like isoform X5] [protein_id=XP_016495547.1] [location=join(58750..58792,58905..59109,59199..59256,59328..59645,59732..59977,60051..60149,60229..60261,60361..60546,60627..60821,60902..60977,61066..61961)] [gbkey=CDS]
Sequence

ATGGCAGAGTTTTCTGGCTGCACTGGTCATCTATACAGCTTGGCTTACCGGGATAAAACC
ACATATGTACTAGTTGATAGCCACAAAAGGATTGCTAAGAAGTATGCAAGAACTTGGATG
ATTTGTGATGTCATATCAACAATCCCTTCAGAACTTGCCAGGAAAATCCCGAAACCTTTT
GATGAATATGATTTATTCTATATGCTTCGTCTCTGGCGTTTACGAAGAGTTAGTGCCTTG
TTTGCCAGATTGGAGAAAGATAGGAATTTCAATTACTATTGTGTCCGATGTGCAAAGCTT
ATATGTGTCACTCTTTTTGCTGTTCACTGTGCTGGATGCTTTTATTATCTTATTGCAGCT
CATTATCCAGACCCAAACAAGACATGGATTGGGGCATCTATGGATGACTTCCTTAATCAG
AGTCTATGGAATCGTTATATCACTTCTATTTATTGGTCAATAACTACTCTTACTACAGTA
GGTTATGGTGATCTGCATCCGGAGAATACACGGGAGATGATCTTTGATATTTTTTACATG
CTTTTTAACTTGGGCCTCACAGCTTATCTAATAGGAAATATGACACTCTTGATTGTCCAC
GAGACAAGTAGGACTAGACAGTTTAGAGACACAATTCAAGCTGCTTCCAATTTTGCACAG
AGGAACCAATTGCCTGCTCGGCTCCAAGATCAGATGGTAGCACACTTGTGCTTGAAATAC
AGAACAGATTCAGAGGGAGTGCAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCAATC
CGCTCAAGCATTTCACATTATCTTTTCTACTCTCTAGTAGATGGGGTTTACTTGTTCAAT
GGCGTGTCAAATGATTTACTCTTCCAGCTGGTCTCAGAGATGAAGGCAGAGTATTTTCCT
CCCAAAGAGGATGTCATTTTGCAGAATGAAGCACCAACTGACTTCTATATTTTAGTAACA
GGAGATGTGGATCTATTGATACTTAAAAATGGAGCTGAACAGGTCATAGGGGAGGTCAAG
GCTGGTGATCTTTGTGGTGAGATTGGCGTTCTTTGTTACATGCCTCAGCTATTTGCAGTA
CGAACAAAGAGCCTAACTCAGCTACTCAGAATGAACCGCACAACATTTTTGAACATTGTC
CAGGCCAATGTTGGAGATGGGACCATAATCATGAATAATCTCCTGCAGCATCTGAAGGAG
ATGAAGGATCCAATTATGGAAGGAGTTCTGCAGGAGACAGAAAAAATGCTAGCTCGCGGT
AGAATGGACCTTCCTCTCACACTCTGCTTTGCCACACTTAGAGGTGACAACTTGTTGTTG
CATCACTTGTTGAAGCGGGGTCTAGATCCAAATGAATCTGACAAAAATGGGAGATCAGCT
TTGCACATAGCAGCATCTAAAGGACTTGATAATTGTGTGCTTTTGCTTTTGGATTTTGGG
GCCAATCCGAATATTAGAGATTCAGAAGGGAATGTACCATTATGGGAGGCCATTTTAGGG
AAGCATGATTCAGTGATGAGGCTACTCGTCAACAATGGTGCTAAACTTTCAGCTGGTGAT
GTGTGTCAATTTGCCTGCATTGCTGCTGAACAAAACAACTTGAATTTGCTCAAGAAAATT
GTCCATTATGGTGGGGATATCACAAGTCCCAATATCAATGGATCATCATCAGCCCTGCAT
GTTGCTGTTTGTGAAGGAAACGTTGAAATAGTAAACTACCTCTTGGATCAGGGGGCTAAT
ATTGACCAAGTAGACCAACATGGTTGGACCCCGAGGGACCTAGCTGTGCAGCAGGGACAT
GAAGATATCAAATTACTCTTTCAATCCAAGAAACTCACAACAACTCAAACTATCCCTGAG
GAACATCCTCAGTCTGGAGTTCGGTTTCTTGGAAGATTCAAAAGCGAGCCAACGATCATG
CCTCCTATGTTCCAAGGAGGCTCATTTCTAGCAGGAGATGGATCATGGGGGCGATCCCGT
CCTAGACGAAGGACTAATAACTTTCATAACTCATTATTCGGGCTAATGTCAGCTGAGCAG
ACCAATGGGCGTGATTTGTGTTTATCCAAAAACCAGGCTGCAACGGCAGTGACAACCAAG
ACTTATAGTTCCAGAGTAACAGTGAGTTGCCCTGAGAAGGGAGATTTTGCAGGGAAGCTT
GTCTTACGTCCACACAGCTTCCAAGAGCTACTTGAATTTGGTGCCACAAAATACGGAATC
TTGCAGGCCAGAGTTCTAAACAATGATGGAGCTGAAATTGAGGGCATAGAATTAATTAGA
GATGGTGATTTTTTAATCTTTGCTAGTGATGGAGGAGCCAATGAACATTGTTACCCTAGC
GGTGATGATTCTTGA

Peptide Sequence

PEP ID

XP_016495547.1
PEP Infomation

PREDICTED: potassium channel AKT1-like isoform X5 [Nicotiana tabacum]
Sequence

MAEFSGCTGHLYSLAYRDKTTYVLVDSHKRIAKKYARTWMICDVISTIPSELARKIPKPF
DEYDLFYMLRLWRLRRVSALFARLEKDRNFNYYCVRCAKLICVTLFAVHCAGCFYYLIAA
HYPDPNKTWIGASMDDFLNQSLWNRYITSIYWSITTLTTVGYGDLHPENTREMIFDIFYM
LFNLGLTAYLIGNMTLLIVHETSRTRQFRDTIQAASNFAQRNQLPARLQDQMVAHLCLKY
RTDSEGVQQQETLDSLPKAIRSSISHYLFYSLVDGVYLFNGVSNDLLFQLVSEMKAEYFP
PKEDVILQNEAPTDFYILVTGDVDLLILKNGAEQVIGEVKAGDLCGEIGVLCYMPQLFAV
RTKSLTQLLRMNRTTFLNIVQANVGDGTIIMNNLLQHLKEMKDPIMEGVLQETEKMLARG
RMDLPLTLCFATLRGDNLLLHHLLKRGLDPNESDKNGRSALHIAASKGLDNCVLLLLDFG
ANPNIRDSEGNVPLWEAILGKHDSVMRLLVNNGAKLSAGDVCQFACIAAEQNNLNLLKKI
VHYGGDITSPNINGSSSALHVAVCEGNVEIVNYLLDQGANIDQVDQHGWTPRDLAVQQGH
EDIKLLFQSKKLTTTQTIPEEHPQSGVRFLGRFKSEPTIMPPMFQGGSFLAGDGSWGRSR
PRRRTNNFHNSLFGLMSAEQTNGRDLCLSKNQAATAVTTKTYSSRVTVSCPEKGDFAGKL
VLRPHSFQELLEFGATKYGILQARVLNNDGAEIEGIELIRDGDFLIFASDGGANEHCYPS
GDDS

Transcript Sequence

Gene sequence data has not been registered.